Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1 PiroMet-2

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.177.60 Testing Method: B.1.177.60	5792 Country: 5792	3 / 21 Differences: 3 / 21	Go to details
B.1.177.61 Testing Method: B.1.177.61	18 Country: 18	4 / 21 Differences: 4 / 21	Go to details
B.1.177.62 Testing Method: B.1.177.62	844 Country: 844	3 / 21 Differences: 3 / 21	Go to details
B.1.177.63 Testing Method: B.1.177.63	369 Country: 369	3 / 21 Differences: 3 / 21	Go to details
B.1.177.64 Testing Method: B.1.177.64	11 Country: 11	4 / 21 Differences: 4 / 21	Go to details
B.1.177.65 Testing Method: B.1.177.65	1496 Country: 1496	3 / 21 Differences: 3 / 21	Go to details
B.1.177.66 Testing Method: B.1.177.66	24 Country: 24	3 / 21 Differences: 3 / 21	Go to details
B.1.177.67 Testing Method: B.1.177.67	132 Country: 132	3 / 21 Differences: 3 / 21	Go to details
B.1.177.68 Testing Method: B.1.177.68	66 Country: 66	3 / 21 Differences: 3 / 21	Go to details
B.1.177.69 Testing Method: B.1.177.69	567 Country: 567	3 / 21 Differences: 3 / 21	Go to details
B.1.177.7 Testing Method: B.1.177.7	5931 Country: 5931	4 / 21 Differences: 4 / 21	Go to details
B.1.177.70 Testing Method: B.1.177.70	172 Country: 172	3 / 21 Differences: 3 / 21	Go to details
B.1.177.71 Testing Method: B.1.177.71	103 Country: 103	3 / 21 Differences: 3 / 21	Go to details
B.1.177.72 Testing Method: B.1.177.72	329 Country: 329	3 / 21 Differences: 3 / 21	Go to details
B.1.177.73 Testing Method: B.1.177.73	1305 Country: 1305	3 / 21 Differences: 3 / 21	Go to details
B.1.177.74 Testing Method: B.1.177.74	83 Country: 83	3 / 21 Differences: 3 / 21	Go to details
B.1.177.75 Testing Method: B.1.177.75	1011 Country: 1011	3 / 21 Differences: 3 / 21	Go to details
B.1.177.76 Testing Method: B.1.177.76	415 Country: 415	3 / 21 Differences: 3 / 21	Go to details
B.1.177.77 Testing Method: B.1.177.77	1412 Country: 1412	3 / 21 Differences: 3 / 21	Go to details
B.1.177.78 Testing Method: B.1.177.78	94 Country: 94	3 / 21 Differences: 3 / 21	Go to details
B.1.177.8 Testing Method: B.1.177.8	1347 Country: 1347	3 / 21 Differences: 3 / 21	Go to details
B.1.177.80 Testing Method: B.1.177.80	270 Country: 270	5 / 21 Differences: 5 / 21	Go to details
B.1.177.81 Testing Method: B.1.177.81	5616 Country: 5616	3 / 21 Differences: 3 / 21	Go to details
B.1.177.82 Testing Method: B.1.177.82	2278 Country: 2278	3 / 21 Differences: 3 / 21	Go to details
B.1.177.83 Testing Method: B.1.177.83	709 Country: 709	3 / 21 Differences: 3 / 21	Go to details

Acknowledgements