Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1 PiroMet-2

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.177.14 Testing Method: B.1.177.14	184 Country: 184	3 / 21 Differences: 3 / 21	Go to details
B.1.177.15 Testing Method: B.1.177.15	1497 Country: 1497	5 / 21 Differences: 5 / 21	Go to details
B.1.177.16 Testing Method: B.1.177.16	1467 Country: 1467	4 / 21 Differences: 4 / 21	Go to details
B.1.177.17 Testing Method: B.1.177.17	1211 Country: 1211	3 / 21 Differences: 3 / 21	Go to details
B.1.177.18 Testing Method: B.1.177.18	836 Country: 836	3 / 21 Differences: 3 / 21	Go to details
B.1.177.19 Testing Method: B.1.177.19	591 Country: 591	4 / 21 Differences: 4 / 21	Go to details
B.1.177.2 Testing Method: B.1.177.2	218 Country: 218	3 / 21 Differences: 3 / 21	Go to details
B.1.177.20 Testing Method: B.1.177.20	687 Country: 687	3 / 21 Differences: 3 / 21	Go to details
B.1.177.21 Testing Method: B.1.177.21	13329 Country: 13329	3 / 21 Differences: 3 / 21	Go to details
B.1.177.23 Testing Method: B.1.177.23	519 Country: 519	3 / 21 Differences: 3 / 21	Go to details
B.1.177.24 Testing Method: B.1.177.24	791 Country: 791	3 / 21 Differences: 3 / 21	Go to details
B.1.177.25 Testing Method: B.1.177.25	53 Country: 53	3 / 21 Differences: 3 / 21	Go to details
B.1.177.26 Testing Method: B.1.177.26	140 Country: 140	3 / 21 Differences: 3 / 21	Go to details
B.1.177.27 Testing Method: B.1.177.27	101 Country: 101	3 / 21 Differences: 3 / 21	Go to details
B.1.177.28 Testing Method: B.1.177.28	145 Country: 145	3 / 21 Differences: 3 / 21	Go to details
B.1.177.29 Testing Method: B.1.177.29	14 Country: 14	3 / 21 Differences: 3 / 21	Go to details
B.1.177.3 Testing Method: B.1.177.3	120 Country: 120	3 / 21 Differences: 3 / 21	Go to details
B.1.177.30 Testing Method: B.1.177.30	340 Country: 340	3 / 21 Differences: 3 / 21	Go to details
B.1.177.31 Testing Method: B.1.177.31	35 Country: 35	2 / 21 Differences: 2 / 21	Go to details
B.1.177.32 Testing Method: B.1.177.32	864 Country: 864	3 / 21 Differences: 3 / 21	Go to details
B.1.177.33 Testing Method: B.1.177.33	502 Country: 502	3 / 21 Differences: 3 / 21	Go to details
B.1.177.34 Testing Method: B.1.177.34	14 Country: 14	5 / 21 Differences: 5 / 21	Go to details
B.1.177.35 Testing Method: B.1.177.35	1599 Country: 1599	3 / 21 Differences: 3 / 21	Go to details
B.1.177.36 Testing Method: B.1.177.36	61 Country: 61	3 / 21 Differences: 3 / 21	Go to details
B.1.177.37 Testing Method: B.1.177.37	33 Country: 33	3 / 21 Differences: 3 / 21	Go to details

Acknowledgements