Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1 PiroMet-2

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.147 Testing Method: B.1.147	1606 Country: 1606	2 / 21 Differences: 2 / 21	Go to details
B.1.149 Testing Method: B.1.149	76 Country: 76	2 / 21 Differences: 2 / 21	Go to details
B.1.151 Testing Method: B.1.151	103 Country: 103	3 / 21 Differences: 3 / 21	Go to details
B.1.153 Testing Method: B.1.153	63 Country: 63	2 / 21 Differences: 2 / 21	Go to details
B.1.157 Testing Method: B.1.157	229 Country: 229	2 / 21 Differences: 2 / 21	Go to details
B.1.158 Testing Method: B.1.158	15 Country: 15	3 / 21 Differences: 3 / 21	Go to details
B.1.159 Testing Method: B.1.159	83 Country: 83	2 / 21 Differences: 2 / 21	Go to details
B.1.160 Testing Method: B.1.160	37145 Country: 37145	4 / 21 Differences: 4 / 21	Go to details
B.1.160.10 Testing Method: B.1.160.10	124 Country: 124	4 / 21 Differences: 4 / 21	Go to details
B.1.160.11 Testing Method: B.1.160.11	163 Country: 163	4 / 21 Differences: 4 / 21	Go to details
B.1.160.12 Testing Method: B.1.160.12	165 Country: 165	4 / 21 Differences: 4 / 21	Go to details
B.1.160.13 Testing Method: B.1.160.13	54 Country: 54	4 / 21 Differences: 4 / 21	Go to details
B.1.160.14 Testing Method: B.1.160.14	198 Country: 198	4 / 21 Differences: 4 / 21	Go to details
B.1.160.15 Testing Method: B.1.160.15	221 Country: 221	4 / 21 Differences: 4 / 21	Go to details
B.1.160.16 Testing Method: B.1.160.16	524 Country: 524	4 / 21 Differences: 4 / 21	Go to details
B.1.160.17 Testing Method: B.1.160.17	595 Country: 595	4 / 21 Differences: 4 / 21	Go to details
B.1.160.18 Testing Method: B.1.160.18	171 Country: 171	4 / 21 Differences: 4 / 21	Go to details
B.1.160.19 Testing Method: B.1.160.19	27 Country: 27	4 / 21 Differences: 4 / 21	Go to details
B.1.160.20 Testing Method: B.1.160.20	125 Country: 125	4 / 21 Differences: 4 / 21	Go to details
B.1.160.21 Testing Method: B.1.160.21	48 Country: 48	4 / 21 Differences: 4 / 21	Go to details
B.1.160.22 Testing Method: B.1.160.22	164 Country: 164	4 / 21 Differences: 4 / 21	Go to details
B.1.160.23 Testing Method: B.1.160.23	199 Country: 199	4 / 21 Differences: 4 / 21	Go to details
B.1.160.24 Testing Method: B.1.160.24	222 Country: 222	4 / 21 Differences: 4 / 21	Go to details
B.1.160.25 Testing Method: B.1.160.25	135 Country: 135	4 / 21 Differences: 4 / 21	Go to details
B.1.160.26 Testing Method: B.1.160.26	431 Country: 431	4 / 21 Differences: 4 / 21	Go to details

Acknowledgements