Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1 PiroMet-2

Has differencies

  Yes No

Clear filters Search

Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.1.8 Testing Method: B.1.1.8	270 Country: 270	4 / 21 Differences: 4 / 21	Go to details
B.1.1.82 Testing Method: B.1.1.82	27 Country: 27	4 / 21 Differences: 4 / 21	Go to details
B.1.1.83 Testing Method: B.1.1.83	319 Country: 319	4 / 21 Differences: 4 / 21	Go to details
B.1.1.84 Testing Method: B.1.1.84	10 Country: 10	4 / 21 Differences: 4 / 21	Go to details
B.1.1.86 Testing Method: B.1.1.86	26 Country: 26	4 / 21 Differences: 4 / 21	Go to details
B.1.1.87 Testing Method: B.1.1.87	15 Country: 15	4 / 21 Differences: 4 / 21	Go to details
B.1.1.88 Testing Method: B.1.1.88	19 Country: 19	4 / 21 Differences: 4 / 21	Go to details
B.1.1.89 Testing Method: B.1.1.89	150 Country: 150	4 / 21 Differences: 4 / 21	Go to details
B.1.1.90 Testing Method: B.1.1.90	8 Country: 8	4 / 21 Differences: 4 / 21	Go to details
B.1.1.91 Testing Method: B.1.1.91	5 Country: 5	4 / 21 Differences: 4 / 21	Go to details
B.1.1.92 Testing Method: B.1.1.92	30 Country: 30	4 / 21 Differences: 4 / 21	Go to details
B.1.1.93 Testing Method: B.1.1.93	36 Country: 36	2 / 19 Differences: 2 / 19	Go to details
B.1.1.95 Testing Method: B.1.1.95	50 Country: 50	4 / 21 Differences: 4 / 21	Go to details
B.1.1.97 Testing Method: B.1.1.97	34 Country: 34	4 / 21 Differences: 4 / 21	Go to details
B.1.1.98 Testing Method: B.1.1.98	50 Country: 50	4 / 21 Differences: 4 / 21	Go to details
B.1.1.99 Testing Method: B.1.1.99	42 Country: 42	4 / 21 Differences: 4 / 21	Go to details
B.1.103 Testing Method: B.1.103	47 Country: 47	4 / 21 Differences: 4 / 21	Go to details
B.1.104 Testing Method: B.1.104	252 Country: 252	2 / 21 Differences: 2 / 21	Go to details
B.1.105 Testing Method: B.1.105	105 Country: 105	2 / 21 Differences: 2 / 21	Go to details
B.1.106 Testing Method: B.1.106	32 Country: 32	2 / 21 Differences: 2 / 21	Go to details
B.1.108 Testing Method: B.1.108	223 Country: 223	2 / 21 Differences: 2 / 21	Go to details
B.1.110 Testing Method: B.1.110	338 Country: 338	2 / 21 Differences: 2 / 21	Go to details
B.1.110.1 Testing Method: B.1.110.1	10 Country: 10	2 / 21 Differences: 2 / 21	Go to details
B.1.110.2 Testing Method: B.1.110.2	6 Country: 6	2 / 21 Differences: 2 / 21	Go to details
B.1.110.3 Testing Method: B.1.110.3	1774 Country: 1774	3 / 21 Differences: 3 / 21	Go to details

Acknowledgements