Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Minimum sequences

Method

2019-nCoV_N1 (WHO-1) 2019-nCoV_N2 (WHO-2) 2019-nCoV_N3 (WHO-3) E_Sarbeco (WHO-4) RdRP_SARSr (WHO-5) WH-NIC_N (WHO-6) NIID_2019_nCOV_N (WHO-7) JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.6.3 Testing Method: B.6.3	37 Country: 37	0 / 14 Differences: 0 / 14	Go to details
B.6.4 Testing Method: B.6.4	22 Country: 22	0 / 14 Differences: 0 / 14	Go to details
B.6.6 Testing Method: B.6.6	893 Country: 893	0 / 14 Differences: 0 / 14	Go to details
C.1 Testing Method: C.1	241 Country: 241	0 / 14 Differences: 0 / 14	Go to details
C.1.1 Testing Method: C.1.1	53 Country: 53	0 / 14 Differences: 0 / 14	Go to details
C.11 Testing Method: C.11	52 Country: 52	0 / 14 Differences: 0 / 14	Go to details
C.12 Testing Method: C.12	119 Country: 119	0 / 14 Differences: 0 / 14	Go to details
C.13 Testing Method: C.13	17 Country: 17	0 / 14 Differences: 0 / 14	Go to details
C.14 Testing Method: C.14	57 Country: 57	1 / 13 Differences: 1 / 13	Go to details
C.15 Testing Method: C.15	134 Country: 134	0 / 14 Differences: 0 / 14	Go to details
C.16 Testing Method: C.16	253 Country: 253	1 / 14 Differences: 1 / 14	Go to details
C.2 Testing Method: C.2	99 Country: 99	0 / 14 Differences: 0 / 14	Go to details
C.3 Testing Method: C.3	124 Country: 124	0 / 14 Differences: 0 / 14	Go to details
C.4 Testing Method: C.4	22 Country: 22	0 / 14 Differences: 0 / 14	Go to details
C.6 Testing Method: C.6	13 Country: 13	0 / 14 Differences: 0 / 14	Go to details
C.7 Testing Method: C.7	29 Country: 29	0 / 14 Differences: 0 / 14	Go to details
C.8 Testing Method: C.8	104 Country: 104	0 / 14 Differences: 0 / 14	Go to details
C.9 Testing Method: C.9	28 Country: 28	0 / 14 Differences: 0 / 14	Go to details
D.2 Testing Method: D.2	10874 Country: 10874	0 / 14 Differences: 0 / 14	Go to details
D.3 Testing Method: D.3	138 Country: 138	0 / 14 Differences: 0 / 14	Go to details
F.1 Testing Method: F.1	11 Country: 11	2 / 15 Differences: 2 / 15	Go to details
G.1 Testing Method: G.1	25 Country: 25	0 / 14 Differences: 0 / 14	Go to details
H.1 Testing Method: H.1	129 Country: 129	0 / 14 Differences: 0 / 14	Go to details
I.1 Testing Method: I.1	65 Country: 65	0 / 14 Differences: 0 / 14	Go to details
K.1 Testing Method: K.1	34 Country: 34	0 / 14 Differences: 0 / 14	Go to details

Acknowledgements