Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1 PiroMet-2

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.205 Testing Method: B.1.205	44 Country: 44	2 / 21 Differences: 2 / 21	Go to details
B.1.206 Testing Method: B.1.206	1254 Country: 1254	2 / 21 Differences: 2 / 21	Go to details
B.1.208 Testing Method: B.1.208	26 Country: 26	2 / 21 Differences: 2 / 21	Go to details
B.1.210 Testing Method: B.1.210	417 Country: 417	2 / 21 Differences: 2 / 21	Go to details
B.1.211 Testing Method: B.1.211	46 Country: 46	2 / 21 Differences: 2 / 21	Go to details
B.1.212 Testing Method: B.1.212	89 Country: 89	2 / 21 Differences: 2 / 21	Go to details
B.1.213 Testing Method: B.1.213	117 Country: 117	2 / 21 Differences: 2 / 21	Go to details
B.1.214 Testing Method: B.1.214	119 Country: 119	2 / 21 Differences: 2 / 21	Go to details
B.1.214.1 Testing Method: B.1.214.1	50 Country: 50	4 / 21 Differences: 4 / 21	Go to details
B.1.214.2 Testing Method: B.1.214.2	381 Country: 381	4 / 21 Differences: 4 / 21	Go to details
B.1.214.3 Testing Method: B.1.214.3	129 Country: 129	4 / 21 Differences: 4 / 21	Go to details
B.1.214.4 Testing Method: B.1.214.4	112 Country: 112	4 / 21 Differences: 4 / 21	Go to details
B.1.215 Testing Method: B.1.215	106 Country: 106	2 / 21 Differences: 2 / 21	Go to details
B.1.218 Testing Method: B.1.218	199 Country: 199	4 / 21 Differences: 4 / 21	Go to details
B.1.219 Testing Method: B.1.219	138 Country: 138	2 / 21 Differences: 2 / 21	Go to details
B.1.22 Testing Method: B.1.22	815 Country: 815	2 / 21 Differences: 2 / 21	Go to details
B.1.22.1 Testing Method: B.1.22.1	39 Country: 39	3 / 21 Differences: 3 / 21	Go to details
B.1.220 Testing Method: B.1.220	92 Country: 92	2 / 21 Differences: 2 / 21	Go to details
B.1.221 Testing Method: B.1.221	13785 Country: 13785	2 / 21 Differences: 2 / 21	Go to details
B.1.221.1 Testing Method: B.1.221.1	341 Country: 341	2 / 21 Differences: 2 / 21	Go to details
B.1.221.2 Testing Method: B.1.221.2	269 Country: 269	2 / 21 Differences: 2 / 21	Go to details
B.1.221.3 Testing Method: B.1.221.3	1206 Country: 1206	2 / 21 Differences: 2 / 21	Go to details
B.1.221.4 Testing Method: B.1.221.4	253 Country: 253	3 / 21 Differences: 3 / 21	Go to details
B.1.222 Testing Method: B.1.222	563 Country: 563	2 / 21 Differences: 2 / 21	Go to details
B.1.223 Testing Method: B.1.223	352 Country: 352	3 / 21 Differences: 3 / 21	Go to details

Acknowledgements