Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1 PiroMet-2

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.224 Testing Method: B.1.224	42 Country: 42	2 / 21 Differences: 2 / 21	Go to details
B.1.225 Testing Method: B.1.225	67 Country: 67	2 / 21 Differences: 2 / 21	Go to details
B.1.227 Testing Method: B.1.227	20 Country: 20	2 / 21 Differences: 2 / 21	Go to details
B.1.229 Testing Method: B.1.229	202 Country: 202	2 / 21 Differences: 2 / 21	Go to details
B.1.23 Testing Method: B.1.23	152 Country: 152	2 / 21 Differences: 2 / 21	Go to details
B.1.231 Testing Method: B.1.231	28 Country: 28	2 / 21 Differences: 2 / 21	Go to details
B.1.232 Testing Method: B.1.232	2069 Country: 2069	3 / 21 Differences: 3 / 21	Go to details
B.1.233 Testing Method: B.1.233	89 Country: 89	3 / 21 Differences: 3 / 21	Go to details
B.1.234 Testing Method: B.1.234	9907 Country: 9907	2 / 21 Differences: 2 / 21	Go to details
B.1.235 Testing Method: B.1.235	393 Country: 393	2 / 21 Differences: 2 / 21	Go to details
B.1.236 Testing Method: B.1.236	639 Country: 639	2 / 21 Differences: 2 / 21	Go to details
B.1.237 Testing Method: B.1.237	111 Country: 111	2 / 21 Differences: 2 / 21	Go to details
B.1.238 Testing Method: B.1.238	91 Country: 91	2 / 21 Differences: 2 / 21	Go to details
B.1.239 Testing Method: B.1.239	1167 Country: 1167	2 / 21 Differences: 2 / 21	Go to details
B.1.240 Testing Method: B.1.240	7665 Country: 7665	2 / 21 Differences: 2 / 21	Go to details
B.1.240.1 Testing Method: B.1.240.1	40 Country: 40	2 / 21 Differences: 2 / 21	Go to details
B.1.240.2 Testing Method: B.1.240.2	33 Country: 33	2 / 21 Differences: 2 / 21	Go to details
B.1.241 Testing Method: B.1.241	1801 Country: 1801	2 / 21 Differences: 2 / 21	Go to details
B.1.242 Testing Method: B.1.242	51 Country: 51	2 / 21 Differences: 2 / 21	Go to details
B.1.243 Testing Method: B.1.243	18269 Country: 18269	2 / 21 Differences: 2 / 21	Go to details
B.1.243.1 Testing Method: B.1.243.1	46 Country: 46	2 / 21 Differences: 2 / 21	Go to details
B.1.243.2 Testing Method: B.1.243.2	75 Country: 75	6 / 21 Differences: 6 / 21	Go to details
B.1.245 Testing Method: B.1.245	31 Country: 31	2 / 21 Differences: 2 / 21	Go to details
B.1.247 Testing Method: B.1.247	38 Country: 38	2 / 21 Differences: 2 / 21	Go to details
B.1.248 Testing Method: B.1.248	34 Country: 34	2 / 21 Differences: 2 / 21	Go to details

Acknowledgements