Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1 PiroMet-2

Has differencies

  Yes No

Clear filters Search

Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.4.4 Testing Method: B.4.4	70 Country: 70	3 / 21 Differences: 3 / 21	Go to details
B.4.5 Testing Method: B.4.5	86 Country: 86	3 / 21 Differences: 3 / 21	Go to details
B.4.6 Testing Method: B.4.6	86 Country: 86	3 / 21 Differences: 3 / 21	Go to details
B.4.7 Testing Method: B.4.7	105 Country: 105	3 / 21 Differences: 3 / 21	Go to details
B.4.8 Testing Method: B.4.8	24 Country: 24	5 / 21 Differences: 5 / 21	Go to details
B.40 Testing Method: B.40	2759 Country: 2759	2 / 21 Differences: 2 / 21	Go to details
B.41 Testing Method: B.41	112 Country: 112	2 / 21 Differences: 2 / 21	Go to details
B.42 Testing Method: B.42	24 Country: 24	2 / 21 Differences: 2 / 21	Go to details
B.43 Testing Method: B.43	58 Country: 58	2 / 21 Differences: 2 / 21	Go to details
B.44 Testing Method: B.44	10 Country: 10	2 / 21 Differences: 2 / 21	Go to details
B.45 Testing Method: B.45	262 Country: 262	3 / 21 Differences: 3 / 21	Go to details
B.46 Testing Method: B.46	57 Country: 57	2 / 21 Differences: 2 / 21	Go to details
B.47 Testing Method: B.47	47 Country: 47	2 / 21 Differences: 2 / 21	Go to details
B.49 Testing Method: B.49	19 Country: 19	2 / 21 Differences: 2 / 21	Go to details
B.5 Testing Method: B.5	25 Country: 25	2 / 21 Differences: 2 / 21	Go to details
B.50 Testing Method: B.50	15 Country: 15	2 / 21 Differences: 2 / 21	Go to details
B.51 Testing Method: B.51	22 Country: 22	2 / 21 Differences: 2 / 21	Go to details
B.52 Testing Method: B.52	99 Country: 99	2 / 21 Differences: 2 / 21	Go to details
B.53 Testing Method: B.53	85 Country: 85	2 / 21 Differences: 2 / 21	Go to details
B.55 Testing Method: B.55	243 Country: 243	2 / 21 Differences: 2 / 21	Go to details
B.56 Testing Method: B.56	47 Country: 47	2 / 21 Differences: 2 / 21	Go to details
B.57 Testing Method: B.57	63 Country: 63	2 / 21 Differences: 2 / 21	Go to details
B.58 Testing Method: B.58	120 Country: 120	2 / 21 Differences: 2 / 21	Go to details
B.59 Testing Method: B.59	209 Country: 209	4 / 21 Differences: 4 / 21	Go to details
B.6 Testing Method: B.6	1089 Country: 1089	3 / 21 Differences: 3 / 21	Go to details

Acknowledgements