Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1 PiroMet-2

Has differencies

  Yes No

Clear filters Search

Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.36.29 Testing Method: B.1.36.29	2491 Country: 2491	2 / 21 Differences: 2 / 21	Go to details
B.1.36.31 Testing Method: B.1.36.31	671 Country: 671	2 / 21 Differences: 2 / 21	Go to details
B.1.36.33 Testing Method: B.1.36.33	104 Country: 104	2 / 21 Differences: 2 / 21	Go to details
B.1.36.34 Testing Method: B.1.36.34	44 Country: 44	3 / 21 Differences: 3 / 21	Go to details
B.1.36.35 Testing Method: B.1.36.35	400 Country: 400	2 / 21 Differences: 2 / 21	Go to details
B.1.36.36 Testing Method: B.1.36.36	2065 Country: 2065	5 / 21 Differences: 5 / 21	Go to details
B.1.36.37 Testing Method: B.1.36.37	407 Country: 407	2 / 21 Differences: 2 / 21	Go to details
B.1.36.38 Testing Method: B.1.36.38	681 Country: 681	2 / 21 Differences: 2 / 21	Go to details
B.1.36.39 Testing Method: B.1.36.39	279 Country: 279	2 / 21 Differences: 2 / 21	Go to details
B.1.36.7 Testing Method: B.1.36.7	329 Country: 329	2 / 21 Differences: 2 / 21	Go to details
B.1.36.8 Testing Method: B.1.36.8	1046 Country: 1046	2 / 21 Differences: 2 / 21	Go to details
B.1.36.9 Testing Method: B.1.36.9	271 Country: 271	2 / 21 Differences: 2 / 21	Go to details
B.1.360 Testing Method: B.1.360	92 Country: 92	2 / 21 Differences: 2 / 21	Go to details
B.1.361 Testing Method: B.1.361	919 Country: 919	2 / 21 Differences: 2 / 21	Go to details
B.1.362 Testing Method: B.1.362	741 Country: 741	2 / 21 Differences: 2 / 21	Go to details
B.1.362.1 Testing Method: B.1.362.1	15 Country: 15	3 / 21 Differences: 3 / 21	Go to details
B.1.362.2 Testing Method: B.1.362.2	218 Country: 218	2 / 21 Differences: 2 / 21	Go to details
B.1.363 Testing Method: B.1.363	109 Country: 109	2 / 21 Differences: 2 / 21	Go to details
B.1.366 Testing Method: B.1.366	224 Country: 224	2 / 21 Differences: 2 / 21	Go to details
B.1.367 Testing Method: B.1.367	1364 Country: 1364	3 / 21 Differences: 3 / 21	Go to details
B.1.369 Testing Method: B.1.369	7694 Country: 7694	3 / 21 Differences: 3 / 21	Go to details
B.1.369.1 Testing Method: B.1.369.1	42 Country: 42	6 / 21 Differences: 6 / 21	Go to details
B.1.37 Testing Method: B.1.37	72 Country: 72	2 / 21 Differences: 2 / 21	Go to details
B.1.370 Testing Method: B.1.370	131 Country: 131	2 / 21 Differences: 2 / 21	Go to details
B.1.371 Testing Method: B.1.371	907 Country: 907	2 / 21 Differences: 2 / 21	Go to details

Acknowledgements