Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1 PiroMet-2

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.1.418 Testing Method: B.1.1.418	63 Country: 63	4 / 21 Differences: 4 / 21	Go to details
B.1.1.419 Testing Method: B.1.1.419	82 Country: 82	4 / 21 Differences: 4 / 21	Go to details
B.1.1.420 Testing Method: B.1.1.420	1570 Country: 1570	5 / 21 Differences: 5 / 21	Go to details
B.1.1.421 Testing Method: B.1.1.421	33 Country: 33	5 / 21 Differences: 5 / 21	Go to details
B.1.1.422 Testing Method: B.1.1.422	11 Country: 11	5 / 21 Differences: 5 / 21	Go to details
B.1.1.423 Testing Method: B.1.1.423	18 Country: 18	4 / 21 Differences: 4 / 21	Go to details
B.1.1.424 Testing Method: B.1.1.424	41 Country: 41	4 / 21 Differences: 4 / 21	Go to details
B.1.1.425 Testing Method: B.1.1.425	20 Country: 20	5 / 21 Differences: 5 / 21	Go to details
B.1.1.426 Testing Method: B.1.1.426	40 Country: 40	4 / 21 Differences: 4 / 21	Go to details
B.1.1.427 Testing Method: B.1.1.427	7 Country: 7	5 / 21 Differences: 5 / 21	Go to details
B.1.1.428 Testing Method: B.1.1.428	113 Country: 113	4 / 21 Differences: 4 / 21	Go to details
B.1.1.429 Testing Method: B.1.1.429	302 Country: 302	5 / 21 Differences: 5 / 21	Go to details
B.1.1.43 Testing Method: B.1.1.43	70 Country: 70	4 / 21 Differences: 4 / 21	Go to details
B.1.1.430 Testing Method: B.1.1.430	23 Country: 23	4 / 21 Differences: 4 / 21	Go to details
B.1.1.431 Testing Method: B.1.1.431	52 Country: 52	4 / 21 Differences: 4 / 21	Go to details
B.1.1.432 Testing Method: B.1.1.432	1021 Country: 1021	4 / 21 Differences: 4 / 21	Go to details
B.1.1.433 Testing Method: B.1.1.433	615 Country: 615	4 / 20 Differences: 4 / 20	Go to details
B.1.1.434 Testing Method: B.1.1.434	3060 Country: 3060	4 / 21 Differences: 4 / 21	Go to details
B.1.1.435 Testing Method: B.1.1.435	36 Country: 36	3 / 20 Differences: 3 / 20	Go to details
B.1.1.436 Testing Method: B.1.1.436	39 Country: 39	4 / 21 Differences: 4 / 21	Go to details
B.1.1.437 Testing Method: B.1.1.437	113 Country: 113	4 / 21 Differences: 4 / 21	Go to details
B.1.1.438 Testing Method: B.1.1.438	19 Country: 19	4 / 21 Differences: 4 / 21	Go to details
B.1.1.44 Testing Method: B.1.1.44	329 Country: 329	4 / 21 Differences: 4 / 21	Go to details
B.1.1.440 Testing Method: B.1.1.440	93 Country: 93	4 / 21 Differences: 4 / 21	Go to details
B.1.1.441 Testing Method: B.1.1.441	23 Country: 23	5 / 21 Differences: 5 / 21	Go to details

Acknowledgements