Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.1.325 Testing Method: B.1.1.325	44 Country: 44	4 / 21 Differences: 4 / 21	Go to details
B.1.1.326 Testing Method: B.1.1.326	626 Country: 626	4 / 21 Differences: 4 / 21	Go to details
B.1.1.327 Testing Method: B.1.1.327	7 Country: 7	4 / 21 Differences: 4 / 21	Go to details
B.1.1.328 Testing Method: B.1.1.328	165 Country: 165	4 / 21 Differences: 4 / 21	Go to details
B.1.1.329 Testing Method: B.1.1.329	377 Country: 377	4 / 21 Differences: 4 / 21	Go to details
B.1.1.33 Testing Method: B.1.1.33	4449 Country: 4449	5 / 21 Differences: 5 / 21	Go to details
B.1.1.330 Testing Method: B.1.1.330	15 Country: 15	4 / 21 Differences: 4 / 21	Go to details
B.1.1.331 Testing Method: B.1.1.331	87 Country: 87	4 / 21 Differences: 4 / 21	Go to details
B.1.1.332 Testing Method: B.1.1.332	61 Country: 61	4 / 21 Differences: 4 / 21	Go to details
B.1.1.333 Testing Method: B.1.1.333	982 Country: 982	4 / 21 Differences: 4 / 21	Go to details
B.1.1.334 Testing Method: B.1.1.334	5 Country: 5	2 / 21 Differences: 2 / 21	Go to details
B.1.1.335 Testing Method: B.1.1.335	18 Country: 18	2 / 21 Differences: 2 / 21	Go to details
B.1.1.336 Testing Method: B.1.1.336	155 Country: 155	5 / 21 Differences: 5 / 21	Go to details
B.1.1.337 Testing Method: B.1.1.337	456 Country: 456	4 / 21 Differences: 4 / 21	Go to details
B.1.1.338 Testing Method: B.1.1.338	51 Country: 51	5 / 21 Differences: 5 / 21	Go to details
B.1.1.339 Testing Method: B.1.1.339	92 Country: 92	4 / 21 Differences: 4 / 21	Go to details
B.1.1.34 Testing Method: B.1.1.34	88 Country: 88	4 / 21 Differences: 4 / 21	Go to details
B.1.1.340 Testing Method: B.1.1.340	19 Country: 19	4 / 21 Differences: 4 / 21	Go to details
B.1.1.341 Testing Method: B.1.1.341	15 Country: 15	4 / 21 Differences: 4 / 21	Go to details
B.1.1.342 Testing Method: B.1.1.342	18 Country: 18	4 / 21 Differences: 4 / 21	Go to details
B.1.1.343 Testing Method: B.1.1.343	43 Country: 43	4 / 21 Differences: 4 / 21	Go to details
B.1.1.344 Testing Method: B.1.1.344	117 Country: 117	4 / 21 Differences: 4 / 21	Go to details
B.1.1.345 Testing Method: B.1.1.345	23 Country: 23	4 / 21 Differences: 4 / 21	Go to details
B.1.1.346 Testing Method: B.1.1.346	34 Country: 34	4 / 21 Differences: 4 / 21	Go to details
B.1.1.347 Testing Method: B.1.1.347	68 Country: 68	4 / 21 Differences: 4 / 21	Go to details

Acknowledgements