Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.1.270 Testing Method: B.1.1.270	97 Country: 97	4 / 21 Differences: 4 / 21	Go to details
B.1.1.271 Testing Method: B.1.1.271	17 Country: 17	4 / 21 Differences: 4 / 21	Go to details
B.1.1.272 Testing Method: B.1.1.272	190 Country: 190	6 / 21 Differences: 6 / 21	Go to details
B.1.1.273 Testing Method: B.1.1.273	157 Country: 157	4 / 21 Differences: 4 / 21	Go to details
B.1.1.274 Testing Method: B.1.1.274	216 Country: 216	4 / 21 Differences: 4 / 21	Go to details
B.1.1.275 Testing Method: B.1.1.275	111 Country: 111	4 / 21 Differences: 4 / 21	Go to details
B.1.1.277 Testing Method: B.1.1.277	1278 Country: 1278	4 / 21 Differences: 4 / 21	Go to details
B.1.1.279 Testing Method: B.1.1.279	865 Country: 865	5 / 21 Differences: 5 / 21	Go to details
B.1.1.28 Testing Method: B.1.1.28	6713 Country: 6713	4 / 21 Differences: 4 / 21	Go to details
B.1.1.280 Testing Method: B.1.1.280	373 Country: 373	4 / 21 Differences: 4 / 21	Go to details
B.1.1.282 Testing Method: B.1.1.282	77 Country: 77	4 / 21 Differences: 4 / 21	Go to details
B.1.1.283 Testing Method: B.1.1.283	45 Country: 45	4 / 21 Differences: 4 / 21	Go to details
B.1.1.284 Testing Method: B.1.1.284	9639 Country: 9639	5 / 21 Differences: 5 / 21	Go to details
B.1.1.285 Testing Method: B.1.1.285	182 Country: 182	4 / 21 Differences: 4 / 21	Go to details
B.1.1.286 Testing Method: B.1.1.286	341 Country: 341	4 / 21 Differences: 4 / 21	Go to details
B.1.1.288 Testing Method: B.1.1.288	522 Country: 522	4 / 21 Differences: 4 / 21	Go to details
B.1.1.289 Testing Method: B.1.1.289	483 Country: 483	4 / 21 Differences: 4 / 21	Go to details
B.1.1.29 Testing Method: B.1.1.29	98 Country: 98	4 / 21 Differences: 4 / 21	Go to details
B.1.1.290 Testing Method: B.1.1.290	60 Country: 60	4 / 21 Differences: 4 / 21	Go to details
B.1.1.291 Testing Method: B.1.1.291	1591 Country: 1591	4 / 21 Differences: 4 / 21	Go to details
B.1.1.294 Testing Method: B.1.1.294	898 Country: 898	4 / 21 Differences: 4 / 21	Go to details
B.1.1.296 Testing Method: B.1.1.296	52 Country: 52	4 / 21 Differences: 4 / 21	Go to details
B.1.1.297 Testing Method: B.1.1.297	466 Country: 466	4 / 21 Differences: 4 / 21	Go to details
B.1.1.298 Testing Method: B.1.1.298	1491 Country: 1491	4 / 21 Differences: 4 / 21	Go to details
B.1.1.299 Testing Method: B.1.1.299	80 Country: 80	4 / 21 Differences: 4 / 21	Go to details

Acknowledgements