Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1 PiroMet-2

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.444 Testing Method: B.1.444	70 Country: 70	2 / 21 Differences: 2 / 21	Go to details
B.1.445 Testing Method: B.1.445	101 Country: 101	2 / 21 Differences: 2 / 21	Go to details
B.1.446 Testing Method: B.1.446	30 Country: 30	2 / 21 Differences: 2 / 21	Go to details
B.1.448 Testing Method: B.1.448	487 Country: 487	4 / 21 Differences: 4 / 21	Go to details
B.1.450 Testing Method: B.1.450	94 Country: 94	2 / 21 Differences: 2 / 21	Go to details
B.1.451 Testing Method: B.1.451	97 Country: 97	2 / 21 Differences: 2 / 21	Go to details
B.1.452 Testing Method: B.1.452	96 Country: 96	2 / 21 Differences: 2 / 21	Go to details
B.1.453 Testing Method: B.1.453	416 Country: 416	2 / 21 Differences: 2 / 21	Go to details
B.1.456 Testing Method: B.1.456	61 Country: 61	2 / 21 Differences: 2 / 21	Go to details
B.1.458 Testing Method: B.1.458	9 Country: 9	2 / 21 Differences: 2 / 21	Go to details
B.1.459 Testing Method: B.1.459	264 Country: 264	2 / 21 Differences: 2 / 21	Go to details
B.1.460 Testing Method: B.1.460	47 Country: 47	4 / 21 Differences: 4 / 21	Go to details
B.1.462 Testing Method: B.1.462	55 Country: 55	2 / 21 Differences: 2 / 21	Go to details
B.1.463 Testing Method: B.1.463	123 Country: 123	2 / 21 Differences: 2 / 21	Go to details
B.1.465 Testing Method: B.1.465	258 Country: 258	2 / 21 Differences: 2 / 21	Go to details
B.1.466 Testing Method: B.1.466	47 Country: 47	4 / 21 Differences: 4 / 21	Go to details
B.1.466.1 Testing Method: B.1.466.1	156 Country: 156	4 / 21 Differences: 4 / 21	Go to details
B.1.466.2 Testing Method: B.1.466.2	3306 Country: 3306	5 / 21 Differences: 5 / 21	Go to details
B.1.467 Testing Method: B.1.467	46 Country: 46	2 / 21 Differences: 2 / 21	Go to details
B.1.468 Testing Method: B.1.468	129 Country: 129	2 / 21 Differences: 2 / 21	Go to details
B.1.469 Testing Method: B.1.469	252 Country: 252	3 / 21 Differences: 3 / 21	Go to details
B.1.470 Testing Method: B.1.470	272 Country: 272	3 / 21 Differences: 3 / 21	Go to details
B.1.471 Testing Method: B.1.471	391 Country: 391	3 / 21 Differences: 3 / 21	Go to details
B.1.473 Testing Method: B.1.473	74 Country: 74	2 / 21 Differences: 2 / 21	Go to details
B.1.474 Testing Method: B.1.474	527 Country: 527	5 / 21 Differences: 5 / 21	Go to details

Acknowledgements