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COVID-19 In Vitro Diagnostic Devices and Test Methods Database

SARS-CoV-2 target regions

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EPI_ISL ID Virus name Region Country Collection Date Navigate
EPI_ISL ID: EPI_ISL_17276417 Virus name: hCoV-19/Sweden/14_SE300_DC-004090/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276416 Virus name: hCoV-19/Sweden/14_SE300_DC-004122/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276415 Virus name: hCoV-19/Sweden/14_SE300_DC-004113/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276414 Virus name: hCoV-19/Sweden/14_SE300_DC-004105/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276411 Virus name: hCoV-19/Sweden/14_SE300_DC-004149/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276410 Virus name: hCoV-19/Sweden/14_SE300_DC-004121/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276409 Virus name: hCoV-19/Sweden/14_SE300_DC-004112/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276408 Virus name: hCoV-19/Sweden/14_SE300_DC-004104/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276407 Virus name: hCoV-19/Sweden/14_SE300_DC-004100/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276406 Virus name: hCoV-19/Sweden/14_SE300_DC-004128/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276405 Virus name: hCoV-19/Sweden/14_SE300_DC-004120/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276404 Virus name: hCoV-19/Sweden/14_SE300_DC-004111/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276403 Virus name: hCoV-19/Sweden/14_SE300_DC-004095/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276402 Virus name: hCoV-19/Sweden/14_SE300_DC-004087/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276401 Virus name: hCoV-19/Sweden/14_SE300_DC-004099/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276398 Virus name: hCoV-19/Sweden/14_SE300_DC-004110/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276397 Virus name: hCoV-19/Sweden/14_SE300_DC-004094/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276396 Virus name: hCoV-19/Sweden/14_SE300_DC-004086/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276395 Virus name: hCoV-19/Sweden/14_SE300_DE-003524/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276394 Virus name: hCoV-19/Sweden/14_SE300_DC-004078/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276393 Virus name: hCoV-19/Sweden/14_SE300_DC-004126/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276391 Virus name: hCoV-19/Sweden/14_SE300_DC-004109/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276389 Virus name: hCoV-19/Sweden/14_SE300_DC-004148/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276388 Virus name: hCoV-19/Sweden/14_SE300_DC-004075/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details
EPI_ISL ID: EPI_ISL_17276385 Virus name: hCoV-19/Sweden/14_SE300_DC-004108/2023 Region: Europe Country: Sweden Collection Date: 2023-03-21 Go to details

Pre-calculated values are obtained by using ThermonucleotideBLAST (Gans JD, Wolinsky M. 2008), which performs in silico simulations with the NAAT methods stored in our database on the selected high-quality (<1% Ns and <0.05% unique amino acid mutations) and full length (>29,000bp) viral genomes made available by GISAID. The aims are both to detect potential target regions of the NAAT methods and to highlight possible differences with the expected reference sequence which might affect the NAAT performance.

The database contains amplicons collected by screening viral shared genomic sequences of SARSCoV- 2 by in silico determination of PCR-based molecular assays to diagnose COVID-19. The information is retrieved periodically. Acknowledgements

GISAID data provided on this website are subject to GISAID's Terms and Conditions