Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Minimum sequences

Method

2019-nCoV_N1 (WHO-1) 2019-nCoV_N2 (WHO-2) 2019-nCoV_N3 (WHO-3) E_Sarbeco (WHO-4) RdRP_SARSr (WHO-5) WH-NIC_N (WHO-6) NIID_2019_nCOV_N (WHO-7) JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.1.7 Testing Method: B.1.1.7	99863 Country: 99863	1 / 14 Differences: 1 / 14	Go to details
B.1.177 Testing Method: B.1.177	77386 Country: 77386	0 / 15 Differences: 0 / 15	Go to details
B.1 Testing Method: B.1	47613 Country: 47613	0 / 15 Differences: 0 / 15	Go to details
B.1.2 Testing Method: B.1.2	35963 Country: 35963	0 / 15 Differences: 0 / 15	Go to details
B.1.1.29 Testing Method: B.1.1.29	17850 Country: 17850	0 / 14 Differences: 0 / 14	Go to details
B.1.160 Testing Method: B.1.160	14969 Country: 14969	0 / 14 Differences: 0 / 14	Go to details
D.2 Testing Method: D.2	10874 Country: 10874	0 / 14 Differences: 0 / 14	Go to details
B.1.177.21 Testing Method: B.1.177.21	8758 Country: 8758	0 / 15 Differences: 0 / 15	Go to details
B.1.1.1 Testing Method: B.1.1.1	7162 Country: 7162	0 / 14 Differences: 0 / 14	Go to details
B.1.1.284 Testing Method: B.1.1.284	6478 Country: 6478	0 / 13 Differences: 0 / 13	Go to details
B.1.221 Testing Method: B.1.221	6374 Country: 6374	0 / 15 Differences: 0 / 15	Go to details
B.1.258 Testing Method: B.1.258	6172 Country: 6172	0 / 15 Differences: 0 / 15	Go to details
B.1.243 Testing Method: B.1.243	4881 Country: 4881	0 / 15 Differences: 0 / 15	Go to details
B.1.177.12 Testing Method: B.1.177.12	4813 Country: 4813	0 / 15 Differences: 0 / 15	Go to details
B.1.429 Testing Method: B.1.429	4625 Country: 4625	1 / 15 Differences: 1 / 15	Go to details
B.1.1.214 Testing Method: B.1.1.214	4472 Country: 4472	0 / 14 Differences: 0 / 14	Go to details
B.1.1.37 Testing Method: B.1.1.37	4439 Country: 4439	0 / 14 Differences: 0 / 14	Go to details
B.1.1.315 Testing Method: B.1.1.315	4196 Country: 4196	2 / 14 Differences: 2 / 14	Go to details
B.1.36 Testing Method: B.1.36	4165 Country: 4165	0 / 15 Differences: 0 / 15	Go to details
B.1.1.162 Testing Method: B.1.1.162	4080 Country: 4080	0 / 14 Differences: 0 / 14	Go to details
B.1.177.4 Testing Method: B.1.177.4	4008 Country: 4008	0 / 15 Differences: 0 / 15	Go to details
B Testing Method: B	3732 Country: 3732	0 / 15 Differences: 0 / 15	Go to details
B.1.177.7 Testing Method: B.1.177.7	3232 Country: 3232	1 / 15 Differences: 1 / 15	Go to details
B.1.1 Testing Method: B.1.1	3149 Country: 3149	0 / 14 Differences: 0 / 14	Go to details
B.1.369 Testing Method: B.1.369	2932 Country: 2932	1 / 15 Differences: 1 / 15	Go to details

Acknowledgements