Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Minimum sequences

Method

2019-nCoV_N1 (WHO-1) 2019-nCoV_N2 (WHO-2) 2019-nCoV_N3 (WHO-3) E_Sarbeco (WHO-4) RdRP_SARSr (WHO-5) WH-NIC_N (WHO-6) NIID_2019_nCOV_N (WHO-7) JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.6.5 Testing Method: B.6.5	1 Country: 1	1 / 15 Differences: 1 / 15	Go to details
B.1.617 Testing Method: B.1.617	1 Country: 1	0 / 14 Differences: 0 / 14	Go to details
A.7 Testing Method: A.7	2 Country: 2	2 / 15 Differences: 2 / 15	Go to details
C.6 Testing Method: C.6	3 Country: 3	1 / 15 Differences: 1 / 15	Go to details
B.1.499.1 Testing Method: B.1.499.1	4 Country: 4	2 / 15 Differences: 2 / 15	Go to details
C.10 Testing Method: C.10	4 Country: 4	1 / 15 Differences: 1 / 15	Go to details
B.1.1.91 Testing Method: B.1.1.91	5 Country: 5	1 / 15 Differences: 1 / 15	Go to details
B.1.553 Testing Method: B.1.553	5 Country: 5	0 / 15 Differences: 0 / 15	Go to details
B.1.316 Testing Method: B.1.316	5 Country: 5	2 / 14 Differences: 2 / 14	Go to details
B.1.496 Testing Method: B.1.496	5 Country: 5	0 / 15 Differences: 0 / 15	Go to details
B.1.476 Testing Method: B.1.476	5 Country: 5	0 / 15 Differences: 0 / 15	Go to details
B.1.488 Testing Method: B.1.488	5 Country: 5	1 / 14 Differences: 1 / 14	Go to details
B.1.1.444 Testing Method: B.1.1.444	5 Country: 5	1 / 14 Differences: 1 / 14	Go to details
B.1.535 Testing Method: B.1.535	6 Country: 6	0 / 15 Differences: 0 / 15	Go to details
B.1.1.334 Testing Method: B.1.1.334	6 Country: 6	0 / 15 Differences: 0 / 15	Go to details
C.25 Testing Method: C.25	6 Country: 6	1 / 15 Differences: 1 / 15	Go to details
B.1.1.327 Testing Method: B.1.1.327	6 Country: 6	1 / 15 Differences: 1 / 15	Go to details
A.12 Testing Method: A.12	6 Country: 6	0 / 15 Differences: 0 / 15	Go to details
B.1.1.110 Testing Method: B.1.1.110	6 Country: 6	1 / 15 Differences: 1 / 15	Go to details
N.8 Testing Method: N.8	6 Country: 6	1 / 14 Differences: 1 / 14	Go to details
B.1.110.2 Testing Method: B.1.110.2	6 Country: 6	0 / 15 Differences: 0 / 15	Go to details
B.1.1.388 Testing Method: B.1.1.388	6 Country: 6	1 / 15 Differences: 1 / 15	Go to details
B.1.1.484 Testing Method: B.1.1.484	6 Country: 6	1 / 15 Differences: 1 / 15	Go to details
AH.1 Testing Method: AH.1	7 Country: 7	1 / 15 Differences: 1 / 15	Go to details
B.1.1.393 Testing Method: B.1.1.393	7 Country: 7	1 / 15 Differences: 1 / 15	Go to details

Acknowledgements