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COVID-19 In Vitro Diagnostic Devices and Test Methods Database

Detectability of NAAT on SARS-CoV-2 lineages - detail

Variant A.2.2

Number of times sequenced Worldwide
370
Observed in Europe
Yes
Observed in the EU-27
No
Perfectly matching
14
Non-perfectly matching
1
Non-targeted
0

2019-nCoV_N1 (WHO-1)

Analysed on
2021-05-13
Probe mismatches
2

Amplicon

Ref	GACCCCAAAATCAGCGAAATGCACCCCGCATTACGTTTGGTGGACCCTCAGATTCAACTGGCAGTAACCAGA
Ampl	GACCCCAAAATCAGCGAAATGCACCNCCGCATTACGTTTGGTGGACCCTCAGATTCAACTGGCAGTAACCAGA
Diff	.........................N..............................................

2019-nCoV_N2 (WHO-2)

Analysed on
2021-05-13
Perfectly matching
Yes

2019-nCoV_N3 (WHO-3)

Analysed on
2021-05-13
Perfectly matching
Yes

E_Sarbeco (WHO-4)

Analysed on
2021-05-13
Perfectly matching
Yes

RdRP_SARSr (WHO-5)

Analysed on
2021-05-13
Perfectly matching
Yes

WH-NIC_N (WHO-6)

Analysed on
2021-05-13
Perfectly matching
Yes

NIID_2019_nCOV_N (WHO-7)

Analysed on
2021-05-13
Perfectly matching
Yes

JRC-S

Analysed on
2021-05-13
Perfectly matching
Yes

N-Sarbeco

Analysed on
2021-05-13
Perfectly matching
Yes

China-CDC-ORF1ab

Analysed on
2021-05-13
Perfectly matching
Yes

China-CDC-N

Analysed on
2021-05-13
Perfectly matching
Yes

RdRp-nCoV-IP2

Analysed on
2021-05-13
Perfectly matching
Yes

RdRp-nCoV-IP4

Analysed on
2021-05-13
Perfectly matching
Yes

HKU-ORF1b-nsp14

Analysed on
2021-05-13
Perfectly matching
Yes

HKU-N

Analysed on
2021-05-13
Perfectly matching
Yes