Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Minimum sequences

Method

2019-nCoV_N1 (WHO-1) 2019-nCoV_N2 (WHO-2) 2019-nCoV_N3 (WHO-3) E_Sarbeco (WHO-4) RdRP_SARSr (WHO-5) WH-NIC_N (WHO-6) NIID_2019_nCOV_N (WHO-7) JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.467 Testing Method: B.1.467	17 Country: 17	0 / 15 Differences: 0 / 15	Go to details
B.1.263 Testing Method: B.1.263	17 Country: 17	0 / 15 Differences: 0 / 15	Go to details
B.1.1.13 Testing Method: B.1.1.13	17 Country: 17	1 / 15 Differences: 1 / 15	Go to details
C.28 Testing Method: C.28	17 Country: 17	1 / 15 Differences: 1 / 15	Go to details
B.1.1.324 Testing Method: B.1.1.324	17 Country: 17	1 / 15 Differences: 1 / 15	Go to details
B.1.491 Testing Method: B.1.491	17 Country: 17	0 / 15 Differences: 0 / 15	Go to details
B.1.493 Testing Method: B.1.493	17 Country: 17	0 / 15 Differences: 0 / 15	Go to details
B.1.444 Testing Method: B.1.444	17 Country: 17	0 / 15 Differences: 0 / 15	Go to details
B.1.595.2 Testing Method: B.1.595.2	17 Country: 17	0 / 15 Differences: 0 / 15	Go to details
B.1.1.16 Testing Method: B.1.1.16	17 Country: 17	1 / 15 Differences: 1 / 15	Go to details
B.1.184 Testing Method: B.1.184	17 Country: 17	0 / 15 Differences: 0 / 15	Go to details
B.1.596.1 Testing Method: B.1.596.1	17 Country: 17	0 / 15 Differences: 0 / 15	Go to details
B.1.1.395 Testing Method: B.1.1.395	18 Country: 18	1 / 15 Differences: 1 / 15	Go to details
B.1.158 Testing Method: B.1.158	18 Country: 18	1 / 15 Differences: 1 / 15	Go to details
AJ.1 Testing Method: AJ.1	18 Country: 18	2 / 15 Differences: 2 / 15	Go to details
B.1.354 Testing Method: B.1.354	18 Country: 18	0 / 15 Differences: 0 / 15	Go to details
B.1.500 Testing Method: B.1.500	18 Country: 18	0 / 15 Differences: 0 / 15	Go to details
B.1.1.382 Testing Method: B.1.1.382	18 Country: 18	1 / 15 Differences: 1 / 15	Go to details
B.1.1.116 Testing Method: B.1.1.116	18 Country: 18	1 / 15 Differences: 1 / 15	Go to details
B.1.1.129 Testing Method: B.1.1.129	18 Country: 18	1 / 15 Differences: 1 / 15	Go to details
D.4 Testing Method: D.4	18 Country: 18	1 / 15 Differences: 1 / 15	Go to details
B.1.264.1 Testing Method: B.1.264.1	18 Country: 18	0 / 14 Differences: 0 / 14	Go to details
N.10 Testing Method: N.10	18 Country: 18	1 / 14 Differences: 1 / 14	Go to details
B.49 Testing Method: B.49	18 Country: 18	0 / 15 Differences: 0 / 15	Go to details
B.1.1.425 Testing Method: B.1.1.425	18 Country: 18	1 / 15 Differences: 1 / 15	Go to details

Acknowledgements