Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Minimum sequences

Method

2019-nCoV_N1 (WHO-1) 2019-nCoV_N2 (WHO-2) 2019-nCoV_N3 (WHO-3) E_Sarbeco (WHO-4) RdRP_SARSr (WHO-5) WH-NIC_N (WHO-6) NIID_2019_nCOV_N (WHO-7) JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.1.249 Testing Method: B.1.1.249	14 Country: 14	2 / 15 Differences: 2 / 15	Go to details
B.1.1.516 Testing Method: B.1.1.516	15 Country: 15	1 / 15 Differences: 1 / 15	Go to details
B.1.145 Testing Method: B.1.145	15 Country: 15	0 / 15 Differences: 0 / 15	Go to details
B.1.177.34 Testing Method: B.1.177.34	15 Country: 15	1 / 15 Differences: 1 / 15	Go to details
B.1.178 Testing Method: B.1.178	15 Country: 15	0 / 15 Differences: 0 / 15	Go to details
B.1.1.364 Testing Method: B.1.1.364	15 Country: 15	1 / 15 Differences: 1 / 15	Go to details
B.1.1.112 Testing Method: B.1.1.112	15 Country: 15	1 / 15 Differences: 1 / 15	Go to details
B.1.1.114 Testing Method: B.1.1.114	15 Country: 15	1 / 15 Differences: 1 / 15	Go to details
B.4.2 Testing Method: B.4.2	15 Country: 15	1 / 15 Differences: 1 / 15	Go to details
B.1.273 Testing Method: B.1.273	15 Country: 15	1 / 15 Differences: 1 / 15	Go to details
B.1.434 Testing Method: B.1.434	15 Country: 15	0 / 15 Differences: 0 / 15	Go to details
L.4 Testing Method: L.4	16 Country: 16	1 / 15 Differences: 1 / 15	Go to details
C.34 Testing Method: C.34	16 Country: 16	1 / 15 Differences: 1 / 15	Go to details
B.1.77 Testing Method: B.1.77	16 Country: 16	0 / 15 Differences: 0 / 15	Go to details
B.1.1.407 Testing Method: B.1.1.407	16 Country: 16	1 / 15 Differences: 1 / 15	Go to details
B.1.310 Testing Method: B.1.310	16 Country: 16	0 / 15 Differences: 0 / 15	Go to details
B.1.1.271 Testing Method: B.1.1.271	16 Country: 16	1 / 15 Differences: 1 / 15	Go to details
B.1.1.383 Testing Method: B.1.1.383	16 Country: 16	1 / 15 Differences: 1 / 15	Go to details
B.1.249 Testing Method: B.1.249	16 Country: 16	0 / 15 Differences: 0 / 15	Go to details
B.1.1.330 Testing Method: B.1.1.330	16 Country: 16	1 / 15 Differences: 1 / 15	Go to details
B.1.1.184 Testing Method: B.1.1.184	16 Country: 16	1 / 15 Differences: 1 / 15	Go to details
B.1.489 Testing Method: B.1.489	17 Country: 17	0 / 15 Differences: 0 / 15	Go to details
B.1.491 Testing Method: B.1.491	17 Country: 17	0 / 15 Differences: 0 / 15	Go to details
B.1.1.16 Testing Method: B.1.1.16	17 Country: 17	1 / 15 Differences: 1 / 15	Go to details
B.1.493 Testing Method: B.1.493	17 Country: 17	0 / 15 Differences: 0 / 15	Go to details

Acknowledgements