Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Minimum sequences

Method

2019-nCoV_N1 (WHO-1) 2019-nCoV_N2 (WHO-2) 2019-nCoV_N3 (WHO-3) E_Sarbeco (WHO-4) RdRP_SARSr (WHO-5) WH-NIC_N (WHO-6) NIID_2019_nCOV_N (WHO-7) JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.509 Testing Method: B.1.509	584 Country: 584	0 / 15 Differences: 0 / 15	Go to details
B.1.177.24 Testing Method: B.1.177.24	582 Country: 582	0 / 15 Differences: 0 / 15	Go to details
B.1.160.8 Testing Method: B.1.160.8	573 Country: 573	0 / 14 Differences: 0 / 14	Go to details
B.1.177.18 Testing Method: B.1.177.18	562 Country: 562	0 / 15 Differences: 0 / 15	Go to details
B.1.160.7 Testing Method: B.1.160.7	559 Country: 559	0 / 14 Differences: 0 / 14	Go to details
B.1.375 Testing Method: B.1.375	555 Country: 555	1 / 15 Differences: 1 / 15	Go to details
B.1.1.44 Testing Method: B.1.1.44	553 Country: 553	0 / 14 Differences: 0 / 14	Go to details
B.1.396 Testing Method: B.1.396	552 Country: 552	0 / 15 Differences: 0 / 15	Go to details
B.1.1.282 Testing Method: B.1.1.282	551 Country: 551	0 / 14 Differences: 0 / 14	Go to details
B.1.1.4 Testing Method: B.1.1.4	544 Country: 544	1 / 14 Differences: 1 / 14	Go to details
B.1.422 Testing Method: B.1.422	538 Country: 538	1 / 15 Differences: 1 / 15	Go to details
B.1.404 Testing Method: B.1.404	538 Country: 538	0 / 15 Differences: 0 / 15	Go to details
B.1.1.198 Testing Method: B.1.1.198	528 Country: 528	0 / 14 Differences: 0 / 14	Go to details
B.1.222 Testing Method: B.1.222	526 Country: 526	0 / 15 Differences: 0 / 15	Go to details
B.1.1.51 Testing Method: B.1.1.51	525 Country: 525	0 / 14 Differences: 0 / 14	Go to details
B.1.177.11 Testing Method: B.1.177.11	517 Country: 517	0 / 15 Differences: 0 / 15	Go to details
B.1.258.16 Testing Method: B.1.258.16	510 Country: 510	0 / 15 Differences: 0 / 15	Go to details
B.1.177.20 Testing Method: B.1.177.20	502 Country: 502	0 / 15 Differences: 0 / 15	Go to details
B.1.177.19 Testing Method: B.1.177.19	500 Country: 500	1 / 15 Differences: 1 / 15	Go to details
B.3.1 Testing Method: B.3.1	499 Country: 499	0 / 15 Differences: 0 / 15	Go to details
B.1.241 Testing Method: B.1.241	498 Country: 498	0 / 15 Differences: 0 / 15	Go to details
B.1.1.64 Testing Method: B.1.1.64	497 Country: 497	0 / 14 Differences: 0 / 14	Go to details
B.1.1.289 Testing Method: B.1.1.289	496 Country: 496	0 / 14 Differences: 0 / 14	Go to details
B.1.258.7 Testing Method: B.1.258.7	485 Country: 485	0 / 14 Differences: 0 / 14	Go to details
B.1.8 Testing Method: B.1.8	484 Country: 484	0 / 15 Differences: 0 / 15	Go to details

Acknowledgements