Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Minimum sequences

Method

2019-nCoV_N1 (WHO-1) 2019-nCoV_N2 (WHO-2) 2019-nCoV_N3 (WHO-3) E_Sarbeco (WHO-4) RdRP_SARSr (WHO-5) WH-NIC_N (WHO-6) NIID_2019_nCOV_N (WHO-7) JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.147 Testing Method: B.1.147	742 Country: 742	0 / 15 Differences: 0 / 15	Go to details
B.1.1.301 Testing Method: B.1.1.301	738 Country: 738	0 / 14 Differences: 0 / 14	Go to details
B.1.521 Testing Method: B.1.521	734 Country: 734	0 / 15 Differences: 0 / 15	Go to details
B.1.1.50 Testing Method: B.1.1.50	713 Country: 713	1 / 14 Differences: 1 / 14	Go to details
B.1.426 Testing Method: B.1.426	704 Country: 704	0 / 15 Differences: 0 / 15	Go to details
B.1.371 Testing Method: B.1.371	690 Country: 690	0 / 15 Differences: 0 / 15	Go to details
B.1.177.5 Testing Method: B.1.177.5	683 Country: 683	0 / 15 Differences: 0 / 15	Go to details
B.1.22 Testing Method: B.1.22	680 Country: 680	0 / 15 Differences: 0 / 15	Go to details
B.1.127 Testing Method: B.1.127	674 Country: 674	0 / 15 Differences: 0 / 15	Go to details
B.1.367 Testing Method: B.1.367	673 Country: 673	1 / 15 Differences: 1 / 15	Go to details
B.1.363 Testing Method: B.1.363	651 Country: 651	0 / 15 Differences: 0 / 15	Go to details
B.1.320 Testing Method: B.1.320	651 Country: 651	0 / 15 Differences: 0 / 15	Go to details
B.1.400 Testing Method: B.1.400	637 Country: 637	0 / 15 Differences: 0 / 15	Go to details
B.1.1.281 Testing Method: B.1.1.281	636 Country: 636	0 / 14 Differences: 0 / 14	Go to details
B.1.1.220 Testing Method: B.1.1.220	632 Country: 632	0 / 14 Differences: 0 / 14	Go to details
B.1.1.54 Testing Method: B.1.1.54	629 Country: 629	0 / 14 Differences: 0 / 14	Go to details
B.1.1.63 Testing Method: B.1.1.63	621 Country: 621	1 / 14 Differences: 1 / 14	Go to details
B.1.1.8 Testing Method: B.1.1.8	617 Country: 617	0 / 14 Differences: 0 / 14	Go to details
B.1.232 Testing Method: B.1.232	614 Country: 614	0 / 15 Differences: 0 / 15	Go to details
B.1.517 Testing Method: B.1.517	602 Country: 602	1 / 15 Differences: 1 / 15	Go to details
B.1.1.288 Testing Method: B.1.1.288	597 Country: 597	0 / 14 Differences: 0 / 14	Go to details
B.1.36.18 Testing Method: B.1.36.18	596 Country: 596	1 / 15 Differences: 1 / 15	Go to details
B.1.1.317 Testing Method: B.1.1.317	596 Country: 596	0 / 14 Differences: 0 / 14	Go to details
P.2 Testing Method: P.2	588 Country: 588	0 / 14 Differences: 0 / 14	Go to details
B.1.1.269 Testing Method: B.1.1.269	586 Country: 586	0 / 14 Differences: 0 / 14	Go to details

Acknowledgements