Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Minimum sequences

Method

2019-nCoV_N1 (WHO-1) 2019-nCoV_N2 (WHO-2) 2019-nCoV_N3 (WHO-3) E_Sarbeco (WHO-4) RdRP_SARSr (WHO-5) WH-NIC_N (WHO-6) NIID_2019_nCOV_N (WHO-7) JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.422 Testing Method: B.1.422	538 Country: 538	1 / 15 Differences: 1 / 15	Go to details
B.1.1.4 Testing Method: B.1.1.4	544 Country: 544	1 / 14 Differences: 1 / 14	Go to details
B.1.1.282 Testing Method: B.1.1.282	551 Country: 551	0 / 14 Differences: 0 / 14	Go to details
B.1.396 Testing Method: B.1.396	552 Country: 552	0 / 15 Differences: 0 / 15	Go to details
B.1.1.44 Testing Method: B.1.1.44	553 Country: 553	0 / 14 Differences: 0 / 14	Go to details
B.1.375 Testing Method: B.1.375	555 Country: 555	1 / 15 Differences: 1 / 15	Go to details
B.1.160.7 Testing Method: B.1.160.7	559 Country: 559	0 / 14 Differences: 0 / 14	Go to details
B.1.177.18 Testing Method: B.1.177.18	562 Country: 562	0 / 15 Differences: 0 / 15	Go to details
B.1.160.8 Testing Method: B.1.160.8	573 Country: 573	0 / 14 Differences: 0 / 14	Go to details
B.1.177.24 Testing Method: B.1.177.24	582 Country: 582	0 / 15 Differences: 0 / 15	Go to details
B.1.509 Testing Method: B.1.509	584 Country: 584	0 / 15 Differences: 0 / 15	Go to details
B.1.1.269 Testing Method: B.1.1.269	586 Country: 586	0 / 14 Differences: 0 / 14	Go to details
P.2 Testing Method: P.2	588 Country: 588	0 / 14 Differences: 0 / 14	Go to details
B.1.1.317 Testing Method: B.1.1.317	596 Country: 596	0 / 14 Differences: 0 / 14	Go to details
B.1.36.18 Testing Method: B.1.36.18	596 Country: 596	1 / 15 Differences: 1 / 15	Go to details
B.1.1.288 Testing Method: B.1.1.288	597 Country: 597	0 / 14 Differences: 0 / 14	Go to details
B.1.517 Testing Method: B.1.517	602 Country: 602	1 / 15 Differences: 1 / 15	Go to details
B.1.232 Testing Method: B.1.232	614 Country: 614	0 / 15 Differences: 0 / 15	Go to details
B.1.1.8 Testing Method: B.1.1.8	617 Country: 617	0 / 14 Differences: 0 / 14	Go to details
B.1.1.63 Testing Method: B.1.1.63	621 Country: 621	1 / 14 Differences: 1 / 14	Go to details
B.1.1.54 Testing Method: B.1.1.54	629 Country: 629	0 / 14 Differences: 0 / 14	Go to details
B.1.1.220 Testing Method: B.1.1.220	632 Country: 632	0 / 14 Differences: 0 / 14	Go to details
B.1.1.281 Testing Method: B.1.1.281	636 Country: 636	0 / 14 Differences: 0 / 14	Go to details
B.1.400 Testing Method: B.1.400	637 Country: 637	0 / 15 Differences: 0 / 15	Go to details
B.1.320 Testing Method: B.1.320	651 Country: 651	0 / 15 Differences: 0 / 15	Go to details

Acknowledgements