Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Who label

Alpha Beta Delta Epsilon Eta Gamma Iota Kappa Mu Omicron Theta Zeta

ECDC status

DSC VOI VUM

Minimum sequences

Method

WHO-1 WHO-2 WHO-3 WHO-4 WHO-5 WHO-6 WHO-7 JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Diagnostic Kit for SARS-CoV-2 Nucleic Acid(RT-PCR) Omicron-Method JRC-CoV-UCE.1 JRC-CoV-UCE.2 PiroMet-1

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.1.120 Testing Method: B.1.1.120	29 Country: 29	4 / 21 Differences: 4 / 21	Go to details
B.1.1.121 Testing Method: B.1.1.121	480 Country: 480	4 / 21 Differences: 4 / 21	Go to details
B.1.1.122 Testing Method: B.1.1.122	39 Country: 39	4 / 21 Differences: 4 / 21	Go to details
B.1.1.123 Testing Method: B.1.1.123	55 Country: 55	4 / 21 Differences: 4 / 21	Go to details
B.1.1.125 Testing Method: B.1.1.125	97 Country: 97	4 / 21 Differences: 4 / 21	Go to details
B.1.1.127 Testing Method: B.1.1.127	22 Country: 22	4 / 21 Differences: 4 / 21	Go to details
B.1.1.128 Testing Method: B.1.1.128	209 Country: 209	4 / 21 Differences: 4 / 21	Go to details
B.1.1.129 Testing Method: B.1.1.129	56 Country: 56	4 / 21 Differences: 4 / 21	Go to details
B.1.1.13 Testing Method: B.1.1.13	24 Country: 24	4 / 21 Differences: 4 / 21	Go to details
B.1.1.130 Testing Method: B.1.1.130	65 Country: 65	4 / 21 Differences: 4 / 21	Go to details
B.1.1.132 Testing Method: B.1.1.132	118 Country: 118	2 / 21 Differences: 2 / 21	Go to details
B.1.1.133 Testing Method: B.1.1.133	85 Country: 85	4 / 21 Differences: 4 / 21	Go to details
B.1.1.134 Testing Method: B.1.1.134	81 Country: 81	4 / 21 Differences: 4 / 21	Go to details
B.1.1.135 Testing Method: B.1.1.135	273 Country: 273	4 / 21 Differences: 4 / 21	Go to details
B.1.1.136 Testing Method: B.1.1.136	58 Country: 58	4 / 21 Differences: 4 / 21	Go to details
B.1.1.137 Testing Method: B.1.1.137	73 Country: 73	4 / 21 Differences: 4 / 21	Go to details
B.1.1.138 Testing Method: B.1.1.138	166 Country: 166	4 / 21 Differences: 4 / 21	Go to details
B.1.1.139 Testing Method: B.1.1.139	47 Country: 47	4 / 21 Differences: 4 / 21	Go to details
B.1.1.14 Testing Method: B.1.1.14	60 Country: 60	4 / 21 Differences: 4 / 21	Go to details
B.1.1.141 Testing Method: B.1.1.141	752 Country: 752	4 / 21 Differences: 4 / 21	Go to details
B.1.1.142 Testing Method: B.1.1.142	382 Country: 382	4 / 21 Differences: 4 / 21	Go to details
B.1.1.144 Testing Method: B.1.1.144	60 Country: 60	5 / 21 Differences: 5 / 21	Go to details
B.1.1.145 Testing Method: B.1.1.145	21 Country: 21	4 / 21 Differences: 4 / 21	Go to details
B.1.1.147 Testing Method: B.1.1.147	13 Country: 13	4 / 21 Differences: 4 / 21	Go to details
B.1.1.148 Testing Method: B.1.1.148	140 Country: 140	4 / 21 Differences: 4 / 21	Go to details

Acknowledgements