Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Minimum sequences

Method

2019-nCoV_N1 (WHO-1) 2019-nCoV_N2 (WHO-2) 2019-nCoV_N3 (WHO-3) E_Sarbeco (WHO-4) RdRP_SARSr (WHO-5) WH-NIC_N (WHO-6) NIID_2019_nCOV_N (WHO-7) JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.1.231 Testing Method: B.1.1.231	184 Country: 184	0 / 14 Differences: 0 / 14	Go to details
B.1.1.272 Testing Method: B.1.1.272	184 Country: 184	1 / 13 Differences: 1 / 13	Go to details
B.1.453 Testing Method: B.1.453	184 Country: 184	0 / 15 Differences: 0 / 15	Go to details
B.1.413 Testing Method: B.1.413	182 Country: 182	0 / 15 Differences: 0 / 15	Go to details
B.1.1.59 Testing Method: B.1.1.59	181 Country: 181	0 / 14 Differences: 0 / 14	Go to details
B.1.110.3 Testing Method: B.1.110.3	180 Country: 180	0 / 15 Differences: 0 / 15	Go to details
B.1.1.258 Testing Method: B.1.1.258	180 Country: 180	0 / 14 Differences: 0 / 14	Go to details
B.1.1.164 Testing Method: B.1.1.164	176 Country: 176	0 / 14 Differences: 0 / 14	Go to details
R.1 Testing Method: R.1	175 Country: 175	1 / 14 Differences: 1 / 14	Go to details
B.1.1.89 Testing Method: B.1.1.89	173 Country: 173	0 / 14 Differences: 0 / 14	Go to details
B.1.1.159 Testing Method: B.1.1.159	171 Country: 171	0 / 14 Differences: 0 / 14	Go to details
B.1.1.228 Testing Method: B.1.1.228	170 Country: 170	0 / 14 Differences: 0 / 14	Go to details
B.1.157 Testing Method: B.1.157	169 Country: 169	0 / 15 Differences: 0 / 15	Go to details
B.1.1.274 Testing Method: B.1.1.274	169 Country: 169	0 / 14 Differences: 0 / 14	Go to details
B.1.1.280 Testing Method: B.1.1.280	168 Country: 168	0 / 14 Differences: 0 / 14	Go to details
B.1.1.250 Testing Method: B.1.1.250	167 Country: 167	0 / 14 Differences: 0 / 14	Go to details
B.1.1.273 Testing Method: B.1.1.273	167 Country: 167	0 / 14 Differences: 0 / 14	Go to details
B.1.471 Testing Method: B.1.471	165 Country: 165	1 / 15 Differences: 1 / 15	Go to details
B.1.201 Testing Method: B.1.201	164 Country: 164	0 / 15 Differences: 0 / 15	Go to details
B.1.134 Testing Method: B.1.134	163 Country: 163	0 / 15 Differences: 0 / 15	Go to details
B.1.1.200 Testing Method: B.1.1.200	161 Country: 161	0 / 14 Differences: 0 / 14	Go to details
B.1.474 Testing Method: B.1.474	161 Country: 161	2 / 15 Differences: 2 / 15	Go to details
B.1.1.83 Testing Method: B.1.1.83	160 Country: 160	0 / 14 Differences: 0 / 14	Go to details
B.1.112 Testing Method: B.1.112	160 Country: 160	0 / 15 Differences: 0 / 15	Go to details
B.1.1.196 Testing Method: B.1.1.196	159 Country: 159	0 / 14 Differences: 0 / 14	Go to details

Acknowledgements