Detectability of NAAT on SARS-CoV-2 lineages

Lineage

Minimum sequences

Method

2019-nCoV_N1 (WHO-1) 2019-nCoV_N2 (WHO-2) 2019-nCoV_N3 (WHO-3) E_Sarbeco (WHO-4) RdRP_SARSr (WHO-5) WH-NIC_N (WHO-6) NIID_2019_nCOV_N (WHO-7) JRC-S N-Sarbeco China-CDC-ORF1ab China-CDC-N RdRp-nCoV-IP2 RdRp-nCoV-IP4 HKU-ORF1b-nsp14 HKU-N

Has differencies

  Yes No

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Lineage	Times sequenced worldwide	Sequences with differences	Navigate
B.1.216 Testing Method: B.1.216	209 Country: 209	0 / 15 Differences: 0 / 15	Go to details
B.1.3 Testing Method: B.1.3	208 Country: 208	1 / 15 Differences: 1 / 15	Go to details
B.1.1.240 Testing Method: B.1.1.240	206 Country: 206	0 / 13 Differences: 0 / 13	Go to details
B.1.332 Testing Method: B.1.332	205 Country: 205	0 / 15 Differences: 0 / 15	Go to details
B.1.329 Testing Method: B.1.329	205 Country: 205	0 / 15 Differences: 0 / 15	Go to details
B.1.503 Testing Method: B.1.503	202 Country: 202	0 / 15 Differences: 0 / 15	Go to details
B.1.1.191 Testing Method: B.1.1.191	202 Country: 202	0 / 14 Differences: 0 / 14	Go to details
B.1.177.2 Testing Method: B.1.177.2	198 Country: 198	0 / 15 Differences: 0 / 15	Go to details
B.29 Testing Method: B.29	198 Country: 198	0 / 15 Differences: 0 / 15	Go to details
B.1.1.192 Testing Method: B.1.1.192	197 Country: 197	0 / 14 Differences: 0 / 14	Go to details
B.31 Testing Method: B.31	197 Country: 197	1 / 14 Differences: 1 / 14	Go to details
B.1.258.2 Testing Method: B.1.258.2	195 Country: 195	0 / 14 Differences: 0 / 14	Go to details
B.1.324 Testing Method: B.1.324	191 Country: 191	0 / 15 Differences: 0 / 15	Go to details
B.1.36.1 Testing Method: B.1.36.1	191 Country: 191	0 / 15 Differences: 0 / 15	Go to details
B.1.239 Testing Method: B.1.239	189 Country: 189	0 / 15 Differences: 0 / 15	Go to details
B.1.177.23 Testing Method: B.1.177.23	188 Country: 188	0 / 15 Differences: 0 / 15	Go to details
B.1.214 Testing Method: B.1.214	188 Country: 188	1 / 15 Differences: 1 / 15	Go to details
B.1.305 Testing Method: B.1.305	187 Country: 187	0 / 15 Differences: 0 / 15	Go to details
A.2.3 Testing Method: A.2.3	186 Country: 186	0 / 15 Differences: 0 / 15	Go to details
B.1.110 Testing Method: B.1.110	186 Country: 186	0 / 15 Differences: 0 / 15	Go to details
B.1.1.264 Testing Method: B.1.1.264	186 Country: 186	0 / 14 Differences: 0 / 14	Go to details
B.1.346 Testing Method: B.1.346	186 Country: 186	1 / 15 Differences: 1 / 15	Go to details
B.1.9 Testing Method: B.1.9	185 Country: 185	0 / 15 Differences: 0 / 15	Go to details
B.1.1.212 Testing Method: B.1.1.212	185 Country: 185	0 / 14 Differences: 0 / 14	Go to details
B.1.258.9 Testing Method: B.1.258.9	184 Country: 184	0 / 15 Differences: 0 / 15	Go to details

Acknowledgements